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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ELOVL1, ELOVL fatty acid elongase 1
Sequence ID:NM_001256399
NM_022821
NM_001256401
NM_001256402
Entrez Gene ID:64834
Ensembl ID:ENSG00000066322

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, placenta, pooled tissue, prostate, salivary gland, skin, soft tissue, spleen, stem cell, stomach, t-cell, testis, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:1p34.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 43829072 - 43833689

Transcript StartTranscript EndChromosomal Start Chromosomal End
207554382907243829807
7568924382999443830130
8939984383021243830317
99910554383040843830464
105611364383059843830678
113713274383085643831046
132813874383123443831293
138815014383358543833698

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3347272Full LengthBC000618elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 1
30554490Full LengthBC095456elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_073732  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001256399 NP_001243328      
NM_001256401 NP_001243330      
NM_001256402 NP_001243331      
NM_022821 NP_073732 Q9BW60 EC 2.3.1.199 ELO

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF151846 AAD34083 Q9BW60 EC 2.3.1.199
BC000618 AAH00618 Q9BW60 EC 2.3.1.199
BC095456 AAH95456 Q502X7  
AF336793 AAL71993 Q9BW60 EC 2.3.1.199
AK001653 BAA91813 Q9BW60 EC 2.3.1.199
AK222498 BAD96218 Q9BW60 EC 2.3.1.199
AK298163 BAG60436 B4DP24  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ELOVL1 NP_073732 M.musculus Elovl1 54325 Gene Info NP_001034265 92
R.norvegicus Elovl1 679532   NP_001037740 92
A.gambiae AgaP_AGAP004373 1274519   XP_313656 47
D.melanogaster CG31522 40567   NP_730843 45

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)