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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. STC1, stanniocalcin 1
Sequence ID:NM_003155
RefSeqGene ID:NG_029711
Entrez Gene ID:6781
Ensembl ID:ENSG00000159167

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:8p21-p11.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:8: 23701423 - 23712319

NM_003155 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
2131402369943323702552
314133522370883223709043
335334952370975423709896
349638972371191823712319

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5191420Full LengthBC029044stanniocalcin 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003146  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_003155 NP_003146 P52823 Stanniocalcin

Related Sequences

 
mRNAGenPeptSwissProt
U46768 AAA88903 P52823
U25997 AAC09472 P52823
BC029044 AAH29044 P52823
DQ890813 ABM81739  
DQ893968 ABM84894  
AK312589 BAG35483 B2R6I6
AK297734 BAG60084 B4DN22

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens STC1 NP_003146 M.musculus Stc1 20855 Gene Info NP_033311 96
R.norvegicus Stc1 81801   NP_112385 96

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)