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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. TMEM39B, Transmembrane protein 39B
Sequence ID:NM_018056
Entrez Gene ID:55116
Ensembl ID:ENSG00000121775

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1p35.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 32538528 - 32568465

NM_018056 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11503253850232538651
1512773254055132540677
2784973254120332541422
4985813254236332542446
5827363254276432542918
73710733255727532557611
107412613256038432560571
126213823256604232566162
138318163256803132568464

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_018056 NP_060526 Q9GZU3
Q9NW51
 

Related Sequences

 
mRNAGenPeptSwissProt
BC004364 AAH04364 Q9BT39
JF432624 ADZ15841  
AK001177 BAA91535 Q9NW51
AK023331 BAB14530 Q9GZU3
AK091861 BAG52431 B3KRL9
AK296653 BAG59250 B4DKN8
AK298766 BAG60908 B4DQE6
AK300293 BAG62050 B4DTN8
AL136695 CAB66630 Q9GZU3
CR457311 CAG33592 Q9GZU3
CR533536 CAG38567 Q9GZU3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TMEM39B NP_060526 M.musculus Tmem39b 230770 Gene Info NP_955009 96

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)