Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SRSF12, serine/arginine-rich splicing factor 12
Sequence ID:NM_080743
Entrez Gene ID:135295
Ensembl ID:ENSG00000154548

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6q15Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:6: 89808296 - 89827606

NM_080743 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
3130188980567889808665
301931608981483789814978
316132628981514589815246
326333698981687089816976
337036288982754189827799

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4828704Full LengthBC021715serine-arginine repressor protein (35 kDa)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_542781  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_080743 NP_542781 Q8WXF0 RRM_1

Related Sequences

 
mRNAGenPeptSwissProt
BC021715 AAH21715 Q8WXF0
AF449428 AAL57515 Q8WXF0
DQ892070 ABM82996  
DQ895263 ABM86189  
AK314008 BAG36719 Q8WXF0
AK123215 BAG53879 B3KVR7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SRSF12 NP_542781 R.norvegicus Srsf12 297962   NP_001129183 91

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)