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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Hs. ABT1, activator of basal transcription 1
Sequence ID:NM_013375
Entrez Gene ID:29777
Ensembl ID:ENSG00000146109

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

Cytogenetic Location (from UniGene)

Cytogenetic Location:6p22.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:6: 26597190 - 26599200

NM_013375 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5272771Full LengthBC066313activator of basal transcription 1
5574755Full LengthBC048812activator of basal transcription 1

Protein Infomation

NM_013375 NP_037507 Q9ULW3  

Related Sequences

BC048812 AAH48812 Q9ULW3
BC066313 AAH66313 Q9ULW3
EU446795 ABZ92324  
AB027258 BAA86886 Q9ULW3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
H.sapiens ABT1 NP_037507 R.norvegicus Abt1 306960   NP_001020845 84
M.musculus Abt1 30946 Gene Info NP_038952 83
A.gambiae AgaP_AGAP003737 3290889   XP_559505 38
D.melanogaster CG32708 318161   NP_727306 38
S.pombe esf2 2540503   NP_595758 38
D.melanogaster CG40813 5740386   NP_001104071 36
D.melanogaster CG41562 5740411   NP_001104090 36
C.elegans F57B10.8 172368   NP_491887 35
D.melanogaster CG10993 32344   NP_572923 35
N.crassa NCU08668 3878165   XP_962017 35
A.thaliana AT3G56510 824818   NP_001030873 33
D.melanogaster CG6999 31837   NP_572523 33
D.melanogaster CG32706 318160   NP_727307 33
S.cerevisiae ESF2 855790   NP_014452 33

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)