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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SYT2, synaptotagmin II
Sequence ID:NM_001136504
NM_177402
Entrez Gene ID:127833
Ensembl ID:ENSG00000143858

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1q32.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 202559724 - 202561439

 Exon Info From UCSC:
NM_001136504
NM_177402

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40000996Full LengthBC100814synaptotagmin II
40000997Full LengthBC100815synaptotagmin II
40001000Full LengthBC100817synaptotagmin II
40000998IncompleteBC100816synaptotagmin II

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_796376  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001136504 NP_001129976    
NM_177402 NP_796376 Q8N9I0 C2

Related Sequences

 
mRNAGenPeptSwissProt
BC100814 AAI00815 Q8N9I0
BC100815 AAI00816 Q8N9I0
BC100816 AAI00817 A4FU00
BC100817 AAI00818 Q8N9I0
AK090672 BAC03500 Q8N9I0
AK094430 BAC04354 Q8N9I0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SYT2 NP_001129976 M.musculus Syt2 20980 Gene Info NP_033333 98
R.norvegicus Syt2 24805   NP_036797 98

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)