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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Hs. PHF21B, PHD finger protein 21B
Sequence ID:NM_138415
Entrez Gene ID:112885
Ensembl ID:ENSG00000056487

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

Cytogenetic Location (from UniGene)

Cytogenetic Location:22q13.31Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:22: 45277044 - 45404874

 Exon Info From UCSC:

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4634631Full LengthBC012187PHD finger protein 21B

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_612424  

Protein Infomation

NM_001135862 NP_001129334    
NM_001242450 NP_001229379    
NM_138415 NP_612424 Q96EK2 PHD

Related Sequences

BC012187 AAH12187 Q96EK2
AK091480 BAG52373 B1AHC5
AK092243 BAG52506 Q96EK2
AK095777 BAG53127 B3KTL5
AK297317 BAH12544 Q96EK2
AK299836 BAH13143 B7Z657
CR456448 CAG30334 Q96EK2
CU012999 CAK54430  
CU013287 CAK54729  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
H.sapiens PHF21B NP_612424 M.musculus Phf21b 271305 Gene Info NP_001074635 89
R.norvegicus Phf21b 300117   NP_001124152 88

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)