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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ARL5B, ADP-ribosylation factor-like 5B
Sequence ID:NM_178815
Entrez Gene ID:221079
Ensembl ID:ENSG00000165997

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:10p12.31Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:10: 18948390 - 18966242

NM_178815 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
13001894831218948611
3013611895550318955563
3625091895745818957605
5105931896155018961633
5947451896291218963063
74635891896409618966939

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3931095Full LengthBC024163ADP-ribosylation factor-like 5B

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_848930  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_178815 NP_848930 Q96KC2 Arf

Related Sequences

 
mRNAGenPeptSwissProt
BC024163 AAH24163 Q96KC2
AF494061 AAM74076 Q96KC2
DQ893166 ABM84092  
DQ896464 ABM87463  
AK027275 BAB55011 Q96KC2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ARL5B NP_848930 M.musculus Arl5b 75869 Gene Info NP_083742 100

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)