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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SFTPD, surfactant protein D
Sequence ID:NM_003019
Entrez Gene ID:6441
Ensembl ID:ENSG00000133661

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:10q22.2-q23.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:10: 81697507 - 81708861

NM_003019 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
195058169749781697983
5065898170046081700543
5907068170115381701269
7078238170170981701825
8249408170214381702259
94110578170251881702634
105812598170621681706417
126012998170882181708860

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4696173Full LengthBC022318surfactant protein D

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003010  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_003019 NP_003010 P35247 Lectin_C
Collagen

Related Sequences

 
mRNAGenPeptSwissProt
BC022318 AAH22318 P35247
X65018 CAA46152 P35247
CR541948 CAG46746 P35247

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SFTPD NP_003010 R.norvegicus Sftpd 25350   NP_037010 75
M.musculus Sftpd 20390 Gene Info NP_033186 75

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)