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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Hs. SEPSECS, Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase
Sequence ID:NM_016955
RefSeqGene ID:NG_028222
Entrez Gene ID:51091
Ensembl ID:ENSG00000109618

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

Cytogenetic Location (from UniGene)

Cytogenetic Location:4p15.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:4: 25125552 - 25161909

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4138072Full LengthBC023539Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase
8991929Full LengthBC126213Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase
40125753Full LengthBC117202Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_058651  

Protein Infomation

NM_016955 NP_058651 Q9HD40 EC SLA_LP_auto_ag

Related Sequences

AF146396 AAD33963 Q9HD40 EC
AF282065 AAG00491 Q9HD40 EC
BC023539 AAH23539 Q9HD40 EC
BC117202 AAI17203 Q9HD40 EC
BC126213 AAI26214 A1A4F3  
EU832239 ACE86809 Q9HD40 EC
EU832146 ACE87496    
AK292476 BAF85165 Q9HD40 EC
AJ238617 CAB62209 Q9HD40 EC
AJ277541 CAB89517 Q9HD40 EC

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
H.sapiens SEPSECS NP_058651 M.musculus Sepsecs 211006 Gene Info NP_766078 88
A.gambiae AgaP_AGAP012869 3292618   XP_561377 48
A.gambiae AgaP_AGAP003527 1274185   XP_313270 47
D.melanogaster CG1427 40681   NP_649556 47
C.elegans secs-1 179498   NP_505761 45
P.falciparum PFL0255c 811104   XP_001350460 39

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)