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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. IFIT5, interferon-induced protein with tetratricopeptide repeats 5
Sequence ID:NM_012420
Entrez Gene ID:24138
Ensembl ID:ENSG00000152778

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:10q23.31Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:10: 91174518 - 91178576

NM_012420 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12369117432491174559
23740339117696191180757

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5229306Full LengthBC025786interferon-induced protein with tetratricopeptide repeats 5

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_036552  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_012420 NP_036552 Q13325 TPR_1
TPR_2

Related Sequences

 
mRNAGenPeptSwissProt
U34605 AAA84934 Q13325
BC025786 AAH25786 Q13325
AK312358 BAG35276 B2R5X9
AK293346 BAG56862 B4DDV1
CR457031 CAG33312 Q6IAX3

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)