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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SEMA3A, Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A
Sequence ID:NM_006080
RefSeqGene ID:NG_011489
Entrez Gene ID:10371
Ensembl ID:ENSG00000075213

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7p12.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:7: 83590155 - 83824310

 Exon Info From UCSC:
NM_006080

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40034963Full LengthBC111416sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_006071  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_006080 NP_006071 Q14563 ig
Sema

Related Sequences

 
mRNAGenPeptSwissProt
L26081 AAA65938 Q14563
BC111416 AAI11417  
AK289954 BAF82643  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SEMA3A NP_006071 M.musculus Sema3a 20346 Gene Info NP_033178 96
R.norvegicus Sema3a 29751   NP_059006 96
A.gambiae AgaP_AGAP006634 1277221   XP_316666 39
D.melanogaster Sema-2a 36846   NP_477507 39

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)