Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. HHLA2, HERV-H LTR-associating 2
Sequence ID:NM_007072
Entrez Gene ID:11148
Ensembl ID:ENSG00000114455

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3q13.13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 108030631 - 108097126

NM_007072 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1310108021331108021640
311388108047116108047193
389478108070634108070723
479832108072273108072626
8331099108073961108074227
11001417108076690108077007
14181522108081188108081292
15231573108094596108094646
15741638108095339108095403
16392659108096104108097124

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4606764Full LengthBC035971HERV-H LTR-associating 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_009003  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_007072 NP_009003 Q9UM44 V-set

Related Sequences

 
mRNAGenPeptSwissProt
AF126162 AAD48396 Q9UM44
BC035971 AAH35971 Q9UM44
DQ892610 ABM83536  
DQ895850 ABM86776  
AK000692 BAA91323 Q9UM44
AK296644 BAG59244 B4DKN2

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)