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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. TBX18, T-box 18
Sequence ID:NM_001080508
Entrez Gene ID:9096
Ensembl ID:ENSG00000112837

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6q14-q15Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:6: 85453996 - 85472317

NM_001080508 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
129718544415685447126
297230668544821485448308
306731318545397885454042
313232998545763785457804
330034718546641585466586
347235738546997285470073
357437788547226185472465
377940708547360785473898

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9057060Full LengthBC157841T-box 18
40146737Full LengthBC132715T-box 18
6023106IncompleteBC040697T-box 18

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001080508 NP_001073977 O95935  

Related Sequences

 
mRNAGenPeptSwissProt
BC040697 AAH40697 Q8IW86
BC132715 AAI32716 O95935
BC157841 AAI57842 O95935
HQ258462 ADR83216  
AJ010278 CAB37937 O95935

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TBX18 NP_001073977 M.musculus Tbx18 76365 Gene Info NP_076303 95
R.norvegicus Tbx18 315870   NP_001101643 94
C.elegans mab-9 173441   NP_493750 50

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)