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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. NET1, neuroepithelial cell transforming 1
Sequence ID:NM_001047160
NM_005863
NR_073040
Entrez Gene ID:10276
Ensembl ID:ENSG00000173848

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, placenta, pooled tissue, prostate, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:10p15Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:10: 5454567 - 5499598

 Exon Info From UCSC:
NM_001047160
NM_005863

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3048980Full LengthBC010285neuroepithelial cell transforming 1
6137683Full LengthBC053553neuroepithelial cell transforming 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005854  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001047160 NP_001040625 Q7Z628  
NM_005863 NP_005854 Q5SQI7 PH
RhoGEF

Related Sequences

 
mRNAGenPeptSwissProt
U02081 AAB08847 Q7Z628
S82401 AAB37683 Q7Z628
BC010285 AAH10285 Q5SQI7
Q7Z628
BC053553 AAH53553 Q5SQI5
Q7Z628
AB209852 BAD93089 Q59EF9
AK315566 BAG37941 Q5SQI7
AK294244 BAG57540 B4DFS9
AK299335 BAG61338 Q5SQI5
AK302687 BAG63916 B4DZ04
AK304028 BAG64943 B4E1Y1
AJ010046 CAA08974 Q7Z628

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens NET1 NP_001040625 M.musculus Net1 56349 Gene Info NP_062645 87
R.norvegicus Net1 307098   NP_001034112 85

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)