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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CCL7, chemokine (C-C motif) ligand 7
Sequence ID:NM_006273
Entrez Gene ID:6354
Ensembl ID:ENSG00000108688

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17q11.2-q12Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 32598161 - 32598834

NM_006273 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11463259723932597384
1472643259816432598281
2658043259871532599254

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8327726Full LengthBC112258chemokine (C-C motif) ligand 7
8327728Full LengthBC112260chemokine (C-C motif) ligand 7
30418073Full LengthBC092436chemokine (C-C motif) ligand 7
30418262IncompleteBC070240chemokine (C-C motif) ligand 7

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_006264  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_006273 NP_006264 P80098 IL8

Related Sequences

 
mRNAGenPeptSwissProt
AF043338 AAC03538 P80098
BC092436 AAH92436 P80098
BC112258 AAI12259 P80098
BC112260 AAI12261 P80098
HQ258695 ADR83446  
X71087 CAA50405 P80098
Q7Z7Q8
X71087 CAA50406 P80098
X71087 CAA50407 P80098

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CCL7 NP_006264 M.musculus Ccl7 20306 Gene Info NP_038682 64
R.norvegicus Ccl7 287561   NP_001007613 61

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)