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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CHST4, carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 4
Sequence ID:NM_001166395
NM_005769
RefSeqGene ID:NG_029801
Entrez Gene ID:10164
Ensembl ID:ENSG00000140835

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:16q22.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:16: 71560060 - 71572416

 Exon Info From UCSC:
NM_001166395
NM_005769

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5179826Full LengthBC035282carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005760  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001166395 NP_001159867    
NM_005769 NP_005760 Q8NCG5 Sulfotransfer_1

Related Sequences

 
mRNAGenPeptSwissProt
AF131235 AAD33015 Q8NCG5
AF280088 AAG48246 Q8NCG5
BC035282 AAH35282 Q8NCG5
AF149783 AAK48417 Q8NCG5
DQ892110 ABM83036  
DQ895304 ABM86230  
AK074746 BAC11177 Q8NCG5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CHST4 NP_005760 M.musculus Chst4 26887 Gene Info NP_036128 73
R.norvegicus Chst4 307838   NP_001100897 73

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)