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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. RNF168, ring finger protein 168, E3 ubiquitin protein ligase
Sequence ID:NM_152617
RefSeqGene ID:NG_023425
Entrez Gene ID:165918
Ensembl ID:ENSG00000163961

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3q29Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 196199191 - 196230639

NM_152617 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
284008196195662196199642
40094090196202101196202182
40914212196210640196210761
42134392196214269196214448
43934469196215477196215553
44705365196229743196230638

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5163887Full LengthBC033791ring finger protein 168
3946999IncompleteBC017442ring finger protein 168

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_689830  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_152617 NP_689830 Q8IYW5 zf-C3HC4

Related Sequences

 
mRNAGenPeptSwissProt
BC033791 AAH33791 Q8IYW5
AK054732 BAB70801 Q8IYW5
AK093113 BAC04060 Q8IYW5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RNF168 NP_689830 R.norvegicus Rnf168 690043   NP_001121069 66
M.musculus Rnf168 70238 Gene Info NP_081631 65

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)