Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SMARCD2, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2
Sequence ID:NM_001098426
NM_003077
Entrez Gene ID:6603
Ensembl ID:ENSG00000108604

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pituitary gland, placenta, pooled tissue, prostate, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:17q23-q24Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 61909443 - 61910750


Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8860380Full LengthBC142963SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2
9020309Full LengthBC136322SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2
4303183IncompleteBC018953SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001098426 NP_001091896 Q92925  

Related Sequences

 
mRNAGenPeptSwissProt
U66618 AAC50696 Q92925
AF113019 AAF20280 Q92925
BC018953 AAH18953 Q92925
BC136322 AAI36323 B9EGA3
BC142963 AAI42964 Q92925
AK300939 BAG62568 Q92925
AK303951 BAG64878 Q92925

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SMARCD2 NP_001091896 R.norvegicus Smarcd2 83833   NP_114189 98
M.musculus Smarcd2 83796 Gene Info NP_001123659 98

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)