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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. VAX2, ventral anterior homeobox 2
Sequence ID:NM_012476
RefSeqGene ID:NG_030009
Entrez Gene ID:25806
Ensembl ID:ENSG00000116035

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2p13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 71127710 - 71160573

NM_012476 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12797112771971127997
2804677114822771148414
46811447115989671160572

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4304066Full LengthBC006336ventral anterior homeobox 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_036608  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_012476 NP_036608 Q9UIW0 Homeobox

Related Sequences

 
mRNAGenPeptSwissProt
BC006336 AAH06336 Q9UIW0
BT007035 AAP35683 Q9UIW0
AB593145 BAJ84079 F1T0K5
Y17791 CAB56166 Q9UIW0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens VAX2 NP_036608 M.musculus Vax2 24113 Gene Info NP_036042 88
R.norvegicus Vax2 64572   NP_072159 86

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)