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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. TLX3, T-cell leukemia homeobox 3
Sequence ID:NM_021025
Entrez Gene ID:30012
Ensembl ID:ENSG00000164438

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5q35.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:5: 170736287 - 170739138

NM_021025 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1503170736287170736789
504747170737153170737396
7481492170738392170739136

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4906239Full LengthBC017291T-cell leukemia homeobox 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_066305  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_021025 NP_066305 O43711 Homeobox

Related Sequences

 
mRNAGenPeptSwissProt
BC017291 AAH17291 O43711
DQ892654 ABM83580  
DQ895893 ABM86819  
DQ896085 ABM87084  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TLX3 NP_066305 M.musculus Tlx3 27140 Gene Info NP_064300 100
R.norvegicus Tlx3 497881   XP_573065 100
D.melanogaster C15 42544   NP_476873 67
A.gambiae AgaP_AGAP003674 1274348   XP_313455 57

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)