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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. TNFSF18, tumor necrosis factor (ligand) superfamily, member 18
Sequence ID:NM_005092
Entrez Gene ID:8995
Ensembl ID:ENSG00000120337

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1q23Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 173010506 - 173020012

NM_005092 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1494173010359173010852
495525173013078173013108
526748173019880173020102

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
7262107Full LengthBC069319tumor necrosis factor (ligand) superfamily, member 18
7939831Full LengthBC093986tumor necrosis factor (ligand) superfamily, member 18
8327500Full LengthBC112032tumor necrosis factor (ligand) superfamily, member 18
7216928IncompleteBC069111tumor necrosis factor (ligand) superfamily, member 18

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005083  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_005092 NP_005083 Q9UNG2 TNF

Related Sequences

 
mRNAGenPeptSwissProt
AF117713 AAD19695 Q9UNG2
AF125303 AAD22634 Q9UNG2
BC069111 AAH69111 Q9UNG2
BC069319 AAH69319 Q9UNG2
BC093986 AAH93986 Q9UNG2
BC112032 AAI12033 Q9UNG2
AY358868 AAQ89227 Q9UNG2
AK313273 BAG36082 Q9UNG2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TNFSF18 NP_005083 R.norvegicus Tnfsf18 364031   XP_344167 56
M.musculus Tnfsf18 240873 Gene Info NP_899247 53

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)