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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. XCR1, chemokine (C motif) receptor 1
Sequence ID:NM_001024644
NM_005283
Entrez Gene ID:2829
Ensembl ID:ENSG00000173578

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3p21.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 46063331 - 46068979

 Exon Info From UCSC:
NM_001024644
NM_005283

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6971949Full LengthBC095533chemokine (C motif) receptor 1
7216889Full LengthBC069075chemokine (C motif) receptor 1
7262280Full LengthBC069589chemokine (C motif) receptor 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005274  NP_001019815  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001024644 NP_001019815 P46094 7tm_1
NM_005283 NP_005274 P46094 7tm_1

Related Sequences

 
mRNAGenPeptSwissProt
BC069075 AAH69075 P46094
BC069589 AAH69589 P46094
BC095533 AAH95533 Q502V0
AB189434 BAD38891 Q689E2
AB189435 BAD38892 Q689E2
AK314277 BAG36937 B2RAP0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens XCR1 NP_005274 M.musculus Xcr1 23832 Gene Info NP_035928 72
R.norvegicus Xcr1 301086   NP_001100341 71

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)