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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PNPLA5, Patatin-like phospholipase domain containing 5
Sequence ID:NM_138814
NM_001177675
Entrez Gene ID:150379
Ensembl ID:ENSG00000100341

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:22q13.31Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:22: 44275558 - 44287890

 Exon Info From UCSC:
NM_138814
NM_001177675

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4778605Full LengthBC031820patatin-like phospholipase domain containing 5
8143842Full LengthBC104839patatin-like phospholipase domain containing 5
8143846Full LengthBC104843patatin-like phospholipase domain containing 5

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_620169  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001177675 NP_001171146    
NM_138814 NP_620169 Q7Z6Z6 Patatin

Related Sequences

 
mRNAGenPeptSwissProt
BC031820 AAH31820 Q7Z6Z6
BC104839 AAI04840 Q7Z6Z6
BC104843 AAI04844 Q7Z6Z6
AK127172 BAC86866 Q7Z6Z6
AK056648 BAG51773 Q7Z6Z6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PNPLA5 NP_620169 R.norvegicus Pnpla5 300108   NP_001123969 74
M.musculus Pnpla5 75772 Gene Info NP_083703 69

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)