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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. KRTAP1-1, keratin associated protein 1-1
Sequence ID:NM_030967
Entrez Gene ID:81851
Ensembl ID:ENSG00000188581

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17q12Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 39196809 - 39197713

NM_030967 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
19033919681039197712

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8144072Full LengthBC105069keratin associated protein 1-1
8144074Full LengthBC105071keratin associated protein 1-1
7262155IncompleteBC069321keratin associated protein 1-1
7262167IncompleteBC069450keratin associated protein 1-1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_112229  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_030967 NP_112229 Q07627 Keratin_B2

Related Sequences

 
mRNAGenPeptSwissProt
BC105069 AAI05070 Q07627
BC105071 AAI05072 Q07627
AB052868 BAB61024 Q07627
AB052934 BAB61026 Q07627
AB055057 BAB61031 Q07627
AJ406926 CAC27565 Q07627

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens KRTAP1-1 NP_112229 M.musculus Krtap1-4 629873 Gene Info NP_001034591 78
R.norvegicus LOC100361571 100361571   XP_002727862 76

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)