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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. RANBP1, RAN binding protein 1
Sequence ID:NM_002882
Entrez Gene ID:5902
Ensembl ID:ENSG00000099901

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:22q11.21Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:22: 20111661 - 20114704

NM_002882 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11642010502320105186
1653012010653520106671
3024592010978620109943
4605882011283020112958
5896542011382520113890
6558842011447420114703

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100015946BC152785RAN binding protein 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002873  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_002882 NP_002873 P43487 Ran_BP1

Related Sequences

 
mRNAGenPeptSwissProt
BC152785 AAI52786  
D38076 BAA07269 P43487
AK223506 BAD97226 Q53EY3
AK097659 BAG53504 B3KUP2
AK293502 BAG56987 B4DE76
X83617 CAA58592 P43487
CR456556 CAG30442 P43487
CU013156 CAK54587  
CU013444 CAK54886  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RANBP1 NP_002873 M.musculus Ranbp1 19385 Gene Info NP_035369 95
R.norvegicus Ranbp1 360739   NP_001101794 95
N.crassa NCU00443 3872845   XP_956707 56
S.pombe sbp1 2540142   NP_595122 56
S.cerevisiae YRB1 851565   NP_010285 55
P.falciparum PFD0950w 812489   XP_001351504 46

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta