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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. MPDU1, mannose-P-dolichol utilization defect 1
Sequence ID:NM_004870
NR_024603
RefSeqGene ID:NG_009204
Entrez Gene ID:9526
Ensembl ID:ENSG00000129255

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, t-cell, testis, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Associated Diseases (from OMIM)

DiseaseOther Genes
CONGENITAL DISORDER OF GLYCOSYLATION, TYPE IF 

Cytogenetic Location (from UniGene)

Cytogenetic Location:17p13.1-p12Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 7487165 - 7491508

NM_004870 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
131974869647487282
32038574890497489114
38651874892637489395
51960474900097490094
60572374902167490334
72483474904787490588
835161674907437491524

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3536216Full LengthBC001898mannose-P-dolichol utilization defect 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_004861  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_004870 NP_004861 O75352 PQ-loop

Related Sequences

 
mRNAGenPeptSwissProt
AF038961 AAC39875 O75352
AF258568 AAG23771 Q8WY80
AF059752 AAG43121 Q9H3L2
BC001898 AAH01898 O75352
DQ499597 ABF54968 Q1HDL3
HQ448685 ADQ33163  
AK027742 BAB55334 Q96K24
AK055923 BAB71046 Q96N63
AK314527 BAG37121 B2RB74
AK075299 BAG52103 O75352
AK297001 BAG59539 B4DLH7
AK297691 BAG60049 B4DMY7
AK300083 BAG61886 B4DT74
AK300140 BAG61926 B4DTB4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens MPDU1 NP_004861 M.musculus Mpdu1 24070 Gene Info NP_036030 91
R.norvegicus Mpdu1 303244   NP_001100481 89
A.gambiae AgaP_AGAP008375 1277606   XP_317078 55
D.melanogaster CG3792 33717   NP_608889 49
C.elegans F38E1.9 179218   NP_505155 40
N.crassa NCU11327 3881423   XP_965266 39
A.thaliana AT5G59470 836066   NP_200755 38
A.thaliana AT4G07390 826170   NP_567315 38

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)