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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. RDH10, retinol dehydrogenase 10 (all-trans)
Sequence ID:NM_172037
Entrez Gene ID:157506
Ensembl ID:ENSG00000121039

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:8q21.11Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:8: 74207264 - 74235426

NM_172037 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
15497420726474207812
5507857420942874209663
7868847423133074231428
88510307423316674233311
103111627423491374235044
116335297423514774237513

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6153778Full LengthBC067131retinol dehydrogenase 10 (all-trans)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_742034  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_172037 NP_742034 Q8IZV5 EC 1.1.1.300 adh_short

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC067131 AAH67131 Q8IZV5 EC 1.1.1.300
AF456765 AAN64747 Q8IZV5 EC 1.1.1.300
AY358270 AAQ88637 Q8IZV5 EC 1.1.1.300

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RDH10 NP_742034 M.musculus Rdh10 98711 Gene Info NP_598593 99
R.norvegicus Rdh10 353252   NP_852143 99

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)