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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SOX8, SRY (sex determining region Y)-box 8
Sequence ID:NM_014587
RefSeqGene ID:NG_009933
Entrez Gene ID:30812
Ensembl ID:ENSG00000005513

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:16p13.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:16: 1032276 - 1036978

NM_014587 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
153710318071032343
53877010337271033959
771304810347001036977

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4937883Full LengthBC031797SRY (sex determining region Y)-box 8

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_055402  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_014587 NP_055402 P57073 HMG_box

Related Sequences

 
mRNAGenPeptSwissProt
AF226675 AAF35886 P57073
AF164104 AAF37424 P57073
BC031797 AAH31797 P57073
AK024491 BAB15781 Q9H7I9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SOX8 NP_055402 M.musculus Sox8 20681 Gene Info NP_035577 85
R.norvegicus Sox8 302993   NP_001100459 85

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)