Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CD48, CD48 molecule
Sequence ID:NM_001256030
NM_001778
Entrez Gene ID:962
Ensembl ID:ENSG00000117091

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1q21.3-q22Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 160650211 - 160681611

Transcript StartTranscript EndChromosomal Start Chromosomal End
32415160648537160648920
416682160650991160651257
683985160654676160654978
9861099160681471160681584

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4850933Full LengthBC016182CD48 molecule
5223308Full LengthBC030224CD48 molecule

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001256030 NP_001242959    
NM_001778 NP_001769 P09326  

Related Sequences

 
mRNAGenPeptSwissProt
M37766 AAA36211 P09326
M59904 AAA62834 P09326
BC016182 AAH16182 P09326
BC030224 AAH30224 Q8MGR0
BT019813 AAV38616 P09326
DQ896316 ABM87315  
EU176422 ABW03873  
X06341 CAA29647 P09326
CR457012 CAG33293 Q6IAZ2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CD48 NP_001769 M.musculus Cd48 12506 Gene Info NP_031675 55
R.norvegicus Cd48 245962   NP_620803 53

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)