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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. MTNR1A, melatonin receptor 1A
Sequence ID:NM_005958
Entrez Gene ID:4543
Ensembl ID:ENSG00000168412

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4q35.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:4: 187454999 - 187455504

NM_005958 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1903187454808187455710
9041105187476335187476536

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8992013Full LengthBC126297melatonin receptor 1A
8992015Full LengthBC126299melatonin receptor 1A
30915274Full LengthBC074947melatonin receptor 1A
30915497Full LengthBC074946melatonin receptor 1A
40022588IncompleteBC113816melatonin receptor 1A

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005949  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_005958 NP_005949 P48039 7tm_1

Related Sequences

 
mRNAGenPeptSwissProt
U14108 AAB17720 P48039
BC074946 AAH74946 P48039
BC074947 AAH74947 P48039
BC113816 AAI13817 Q29RX9
BC126297 AAI26298 P48039
BC126299 AAI26300 P48039
AF435588 AAL30809 Q8WZ72
EU432127 ABY87926 P48039
HQ258378 ADR83132  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens MTNR1A NP_005949 M.musculus Mtnr1a 17773 Gene Info NP_032665 85
R.norvegicus Mtnr1a 114211   NP_446128 85
D.melanogaster moody 31168   NP_569970 30

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)