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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CRNN, cornulin
Sequence ID:NM_016190
Entrez Gene ID:49860
Ensembl ID:ENSG00000143536

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1q21Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 152381718 - 152386728

NM_016190 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11701152381718152383418
17021852152384571152384721
18531913152386689152386749

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4271624Full LengthBC030807cornulin

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_057274  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_016190 NP_057274 Q9UBG3 efhand
S_100

Related Sequences

 
mRNAGenPeptSwissProt
AF077831 AAD55747 Q9UBG3
BC030807 AAH30807 Q9UBG3
AK291301 BAF83990 A8K5I6
AK316568 BAG38157 Q9UBG3
AK298640 BAG60815 B4DQ53

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CRNN NP_057274 M.musculus Crnn 381457 Gene Info NP_001074669 57
R.norvegicus Crnn 295186   XP_227367 57

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)