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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SOD3, superoxide dismutase 3, extracellular
Sequence ID:NM_003102
RefSeqGene ID:NG_012213
Entrez Gene ID:6649
Ensembl ID:ENSG00000109610

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4p15.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:4: 24797103 - 24801866

NM_003102 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11892479708424797272
19015282480112724802465

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4644224Full LengthBC014418superoxide dismutase 3, extracellular

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003093  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_003102 NP_003093 P08294 EC 1.15.1.1 Sod_Cu

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
J02947 AAA66000 P08294 EC 1.15.1.1
BC014418 AAH14418 P08294 EC 1.15.1.1
DQ892086 ABM83012    
DQ895280 ABM86206    
AK313935 BAG36654 B2R9V7  
CR541853 CAG46651 P08294 EC 1.15.1.1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SOD3 NP_003093 R.norvegicus Sod3 25352   NP_037012 68
M.musculus Sod3 20657 Gene Info NP_035565 68

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta