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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SLC6A7, solute carrier family 6 (neurotransmitter transporter, L-proline), member 7
Sequence ID:NM_014228
Entrez Gene ID:6534
Ensembl ID:ENSG00000011083

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5q32Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:5: 149569519 - 149590634

 Exon Info From UCSC:
NM_014228

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
7262437Full LengthBC069631solute carrier family 6 (neurotransmitter transporter, L-proline), member 7
7939630Full LengthBC093785solute carrier family 6 (neurotransmitter transporter, L-proline), member 7
8322477Full LengthBC113425solute carrier family 6 (neurotransmitter transporter, L-proline), member 7

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_055043  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_014228 NP_055043 Q99884 SNF

Related Sequences

 
mRNAGenPeptSwissProt
S80071 AAB47007 Q99884
BC069631 AAH69631 Q99884
BC093785 AAH93785 Q99884
BC113425 AAI13426 Q99884
HQ258340 ADR83094  
AK312309 BAG35234 B2R5T7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SLC6A7 NP_055043 M.musculus Slc6a7 240332 Gene Info NP_958741 98
R.norvegicus Slc6a7 117100   NP_446448 98

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)