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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. DERL1, derlin 1
Sequence ID:NM_001134671
NM_024295
Entrez Gene ID:79139
Ensembl ID:ENSG00000136986

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, placenta, pooled tissue, prostate, retina, skin, soft tissue, spleen, stem cell, stomach, synovium, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:8q24.13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:8: 124025585 - 124027251

 Exon Info From UCSC:
NM_001134671
NM_024295

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3345230Full LengthBC002457Der1-like domain family, member 1
4480011IncompleteBC050691Der1-like domain family, member 1
5539794IncompleteBC037174Der1-like domain family, member 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_077271  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001134671 NP_001128143    
NM_024295 NP_077271 Q9BUN8 DER1

Related Sequences

 
mRNAGenPeptSwissProt
AF116708 AAF71128 Q9P1C8
BC002457 AAH02457 Q9BUN8
AY358818 AAQ89177 Q9BUN8
HQ447233 ADQ31720  
AK313675 BAG36426 B2R979
AK124086 BAG54003 Q9BUN8
AK303826 BAG64773 B4E1G1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens DERL1 NP_077271 M.musculus Derl1 67819 Gene Info NP_077169 98
R.norvegicus Derl1 362912   NP_001014224 98
A.gambiae AgaP_AGAP009288 1280254   XP_320085 51
C.elegans cup-2 172915   NP_492721 50
D.melanogaster Der-1 33369   NP_608632 44

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)