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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SENP5, SUMO1/sentrin specific peptidase 5
Sequence ID:NM_152699
Entrez Gene ID:205564
Ensembl ID:ENSG00000119231

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3q29Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 196612945 - 196658256

NM_152699 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1218196594726196594943
2191762196612021196613564
17631868196626536196626641
18692007196626794196626932
20082055196627235196627282
20562133196630403196630480
21342271196650284196650421
22722355196654666196654749
23562406196656503196656553
24076305196657683196661581

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4824344Full LengthBC030705SUMO1/sentrin specific peptidase 5
3448367IncompleteBC008589SUMO1/sentrin specific peptidase 5

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_689912  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_152699 NP_689912 Q96HI0 EC 3.4.22.68 Peptidase_C48

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC008589 AAH08589 Q96HI0 EC 3.4.22.68
BC030705 AAH30705 Q96HI0 EC 3.4.22.68
AF335474 AAK69630 Q96HI0 EC 3.4.22.68
DQ890849 ABM81775    
DQ894003 ABM84929    
AK313764 BAG36502 B2R9F5  
AK302305 BAG63644 B4DY82  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SENP5 NP_689912 M.musculus Senp5 320213 Gene Info NP_796077 83

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)