Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. JAGN1, Jagunal homolog 1 (Drosophila)
Sequence ID:NM_032492
Entrez Gene ID:84522
Ensembl ID:ENSG00000171135

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, kidney, liver, lung, lymphoreticular, mammary gland, muscle, nervous, pancreas, pancreatic islet, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:3p25.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 9932327 - 9935521

NM_032492 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
122599322709932494
226165699345989936028

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4554225Full LengthBC032101jagunal homolog 1 (Drosophila)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_115881  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_032492 NP_115881 Q8N5M9 DUF1352

Related Sequences

 
mRNAGenPeptSwissProt
BC032101 AAH32101 Q8N5M9
AF212230 AAK14916 Q9BY51
DQ892281 ABM83207  
DQ895481 ABM86407  
AK027508 BAB55163 Q8N5M9
AK074760 BAC11188 Q8N5M9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens JAGN1 NP_115881 M.musculus Jagn1 67767 Gene Info NP_080641 98

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)