Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Hs. C1GALT1, core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1
Sequence ID:NM_020156
RefSeqGene ID:NG_027732
Entrez Gene ID:56913
Ensembl ID:ENSG00000106392

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

Cytogenetic Location (from UniGene)

Cytogenetic Location:7p21.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:7: 7273888 - 7283981

NM_020156 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2957836IncompleteBC003174core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1

Protein Infomation

NM_020156 NP_064541 Q9NS00 EC  

Related Sequences

AF155582 AAF81981 Q9NS00 EC
BC003174 AAH03174 Q9NS00 EC
AJ132443 CAC45046 Q9NS00 EC
AJ243256 CAC80435 Q9NS00 EC
AJ278960 CAC82373 Q9NS00 EC

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
H.sapiens C1GALT1 NP_064541 R.norvegicus C1galt1 65044   NP_075239 90
M.musculus C1galt1 94192 Gene Info NP_443719 89
C.elegans C38H2.2 176455   NP_499293 54
A.gambiae AgaP_AGAP009979 1279400   XP_319116 53
D.melanogaster C1GalTA 34215   NP_609258 52

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)