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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. COG5, Component of oligomeric golgi complex 5
Sequence ID:NM_001161520
NM_006348
NM_181733
RefSeqGene ID:NG_028095
Entrez Gene ID:10466
Ensembl ID:ENSG00000164597

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, salivary gland, skin, soft tissue, spleen, stem cell, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:7q31Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:7: 106843426 - 107204485

 Exon Info From UCSC:
NM_001161520
NM_006348
NM_181733

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4374289Full LengthBC068540component of oligomeric golgi complex 5

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001161520 NP_001154992    
NM_006348 NP_006339    
NM_181733 NP_859422 Q9UP83  

Related Sequences

 
mRNAGenPeptSwissProt
AF058718 AAC69276 Q9UP83
BC068540 AAH68540 Q9UP83
HQ258000 ADR82754  
AK022835 BAG51122 B3KMW0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens COG5 NP_006339 M.musculus Cog5 238123 Gene Info NP_001156598 89
R.norvegicus RGD1563296 314030   XP_002729667 89
A.thaliana AT1G67930 843121   NP_176960 33
C.elegans C43E11.11 172025   NP_491339 29

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)