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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ACER3, alkaline ceramidase 3
Sequence ID:NM_018367
Entrez Gene ID:55331
Ensembl ID:ENSG00000078124

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, brain, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:11q13.5Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 76571962 - 76733910

 Exon Info From UCSC:
NM_018367

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3867010Full LengthBC073853alkaline ceramidase 3
5193732IncompleteBC063034phytoceramidase, alkaline
5214265IncompleteBC049837phytoceramidase, alkaline

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_060837  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_018367 NP_060837 Q9NUN7 aPHC

Related Sequences

 
mRNAGenPeptSwissProt
BC073853 AAH73853 Q9NUN7
AF214454 AAK71923 Q9NUN7
AF327353 AAL56013 Q9NUN7
HQ447508 ADQ31994  
AK002100 BAA92085 Q9NUN7
AK315000 BAG37496 Q9NUN7
AK293800 BAH11598 B7Z1R2
AK294978 BAH11938 B7Z2Q2
AK295142 BAH11988 B7Z2V2
AK295327 BAH12032 B7Z2Z6
AK316120 BAH14491 B7Z2V2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ACER3 NP_060837 M.musculus Acer3 66190 Gene Info NP_079684 88
R.norvegicus Acer3 499210   XP_574497 88
N.crassa NCU02969 3881519   XP_965356 45
S.cerevisiae YDC1 856018   NP_015238 38
S.cerevisiae YPC1 852481   NP_009742 37
A.thaliana ATCES1 828328   NP_567660 30

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)