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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. GPBP1L1, GC-rich promoter binding protein 1-like 1
Sequence ID:NM_021639
Entrez Gene ID:60313
Ensembl ID:ENSG00000159592

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:1p34.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 46093163 - 46125979

 Exon Info From UCSC:
NM_021639

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3900818Full LengthBC022218GC-rich promoter binding protein 1-like 1
3909296Full LengthBC015713GC-rich promoter binding protein 1-like 1
6297561Full LengthBC052257GC-rich promoter binding protein 1-like 1
4829660IncompleteBC068578GC-rich promoter binding protein 1-like 1

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_021639 NP_067652 Q9HC44  

Related Sequences

 
mRNAGenPeptSwissProt
AF177334 AAG17978 Q9HC44
BC015713 AAH15713 Q9HC44
BC022218 AAH22218 Q9HC44
BC052257 AAH52257 Q9HC44
DQ892484 ABM83410  
DQ895695 ABM86621  
AK024972 BAB15047 Q9HC44
AL834194 CAD38884 Q9HC44

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens GPBP1L1 NP_067652 M.musculus Gpbp1l1 77110 Gene Info NP_084144 90

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)