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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. LEPROT, leptin receptor overlapping transcript
Sequence ID:NM_001198681
NM_001198683
NM_017526
RefSeqGene ID:NG_015831
Entrez Gene ID:54741
Ensembl ID:ENSG00000213625

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:1p31.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 65899555 - 65901688

Transcript StartTranscript EndChromosomal Start Chromosomal End
11766588624765886422
1772526589098565891060
2534396589554465895730
44046426589748565901687

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4328021Full LengthBC056250leptin receptor overlapping transcript
4296363IncompleteBC011027leptin receptor overlapping transcript

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_059996  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001003679 NP_001003679   fn3
Lep_receptor_Ig
NM_001003680 NP_001003680   fn3
Lep_receptor_Ig
NM_001198681 NP_001185610    
NM_001198683 NP_001185612    
NM_001198687 NP_001185616    
NM_001198688 NP_001185617    
NM_001198689 NP_001185618    
NM_002303 NP_002294 P48357 fn3
Lep_receptor_Ig
NM_017526 NP_059996 O15243 Vps55

Related Sequences

 
mRNAGenPeptSwissProt
U43168 AAA93015 P48357
U66495 AAB07495 P48357
U66496 AAB07496 P48357
U66497 AAB07497 P48357
U50748 AAC23650 P48357
U52912 AAC50509 P48357
U52913 AAC50510 P48357
U52914 AAC50511 P48357
BC011027 AAH11027 O15243
BC031086 AAH31086 Q4G138
BC056250 AAH56250 O15243
BC131779 AAI31780 A2RRQ4
BC160009 AAI60009  
EU832438 ACE86923  
EU832353 ACE87610  
AK290208 BAF82897 A8K2E3
AK074841 BAG52014 O15243
Y12670 CAA73211 O15243
CR541647 CAG46448 O15243
CR541737 CAG46537 O15243

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens LEPROT NP_059996 R.norvegicus Leprot 56766   NP_064484 97
M.musculus Leprot 230514 Gene Info NP_778201 95

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)