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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. COL5A3, collagen, type V, alpha 3
Sequence ID:NM_015719
Entrez Gene ID:50509
Ensembl ID:ENSG00000080573

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:19p13.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:19: 10070926 - 10116647

 Exon Info From UCSC:
NM_015719

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_056534  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_015719 NP_056534 P25940 Collagen
COLFI
Laminin_G_2

Related Sequences

 
mRNAGenPeptSwissProt
AF177941 AAF59902 P25940
AB209175 BAD92412 Q59GD4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens COL5A3 NP_056534 R.norvegicus Col5a3 60379   NP_068528 83
M.musculus Col5a3 53867 Gene Info NP_058615 83

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)