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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Hs. CNGA3, cyclic nucleotide gated channel alpha 3
Sequence ID:NM_001079878
RefSeqGene ID:NG_009097
Entrez Gene ID:1261
Ensembl ID:ENSG00000144191

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

Cytogenetic Location (from UniGene)

Cytogenetic Location:2q11.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 98986399 - 99015064

 Exon Info From UCSC:

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40007383Full LengthBC096298cyclic nucleotide gated channel alpha 3
40007387Full LengthBC096299cyclic nucleotide gated channel alpha 3
40007389Full LengthBC096300cyclic nucleotide gated channel alpha 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001289  

Protein Infomation

NM_001079878 NP_001073347    
NM_001298 NP_001289 Q16281 cNMP_binding

Related Sequences

AF065314 AAC17440 Q16281
BC096298 AAH96298 Q16281
BC096299 AAH96299 Q16281
BC096300 AAH96300 Q16281
AK131300 BAD18468 Q6ZNA7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
H.sapiens CNGA3 NP_001289 R.norvegicus Cnga3 85257   NP_445947 85
M.musculus Cnga3 12790 Gene Info NP_034048 83
A.gambiae AgaP_AGAP009050 1280008   XP_319802 60
D.melanogaster Cng 36806   NP_001188960 59

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)