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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CAPRIN2, caprin family member 2
Sequence ID:NM_001002259
NM_001206856
NM_023925
NM_032156
NR_038177
RefSeqGene ID:NG_029557
Entrez Gene ID:65981
Ensembl ID:ENSG00000110888

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:12p11Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 30881312 - 30884382

 Exon Info From UCSC:
NM_001002259
NM_023925
NM_032156

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40068103Full LengthBC117672caprin family member 2
40068104Full LengthBC117673caprin family member 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001002259  NP_076414  NP_115532  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001002259 NP_001002259 Q6IMN6 C1q
NM_001206856 NP_001193785    
NM_023925 NP_076414   C1q
NM_032156 NP_115532   C1q

Related Sequences

 
mRNAGenPeptSwissProt
BC066295 AAH66295 Q6IMN6
BC111007 AAI11008 Q6IMN6
BC117672 AAI17673 Q6IMN6
BC117673 AAI17674 Q6IMN6
AF326778 AAK83153 Q6IMN6
AY074490 AAL71549 Q6IMN6
AY074491 AAL71550 Q6IMN6
AF525416 AAP80792 Q7Z5L1
AK021453 BAB13830 Q6IMN6
AK026222 BAB15398 Q6IMN6
AB058776 BAB47502 Q96JF4
BX537569 CAD97786 Q7Z3P8
BX538080 CAD98004 Q6IMN6
BK001102 DAA01119 Q6IMN6
BK001103 DAA01120 Q6IMN6
BR000870 FAA00695 Q6IMN6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CAPRIN2 NP_001002259 M.musculus Caprin2 232560 Gene Info NP_853519 82

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)