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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. PSMA7, Proteasome (prosome, macropain) subunit, alpha type, 7
Sequence ID:NM_002792
Entrez Gene ID:5688
Ensembl ID:ENSG00000101182

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, t-cell, testis, thymus, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:20q13.33Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:20: 60711790 - 60718376

NM_002792 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12156071179060712004
2162786071241960712481
2793986071322660713345
3995216071413060714252
5226466071483660714960
6477736071587360715999
7749846071826360718473

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2819923Full LengthBC004427proteasome (prosome, macropain) subunit, alpha type, 7
3535769IncompleteBC001895proteasome (prosome, macropain) subunit, alpha type, 7
4851079IncompleteBC014999proteasome (prosome, macropain) subunit, alpha type, 7

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002783  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_002792 NP_002783 O14818 EC 3.4.25.1 Proteasome

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF022815 AAB81515 O14818 EC 3.4.25.1
AF054185 AAC99402 O14818 EC 3.4.25.1
BC004427 AAH04427 O14818 EC 3.4.25.1
BC014999 AAH14999 Q05DH1  
BT007165 AAP35829 O14818 EC 3.4.25.1
DQ893754 ABM84680    
DQ890589 ABM92206    
AK312025 BAG34962 O14818 EC 3.4.25.1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PSMA7 NP_002783 M.musculus Psma7 26444 Gene Info NP_036099 99
R.norvegicus Psma7 29674   NP_001008218 99

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta