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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CDK13, cyclin-dependent kinase 13
Sequence ID:NM_003718
NM_031267
Entrez Gene ID:8621
Ensembl ID:ENSG00000065883

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, skin, soft tissue, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:7p13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:7: 40099260 - 40135145

 Exon Info From UCSC:
NM_003718
NM_031267

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100068276Full LengthBC168380cell division cycle 2-like 5 (cholinesterase-related cell division controller)
4908582IncompleteBC080601cell division cycle 2-like 5 (cholinesterase-related cell division controller)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003709  NP_112557  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_003718 NP_003709 Q14004 EC 2.7.11.23
EC 2.7.11.22
Pkinase
Pkinase_Tyr
NM_031267 NP_112557     Pkinase
Pkinase_Tyr

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
M80629 AAA58424 Q14004 EC 2.7.11.23
EC 2.7.11.22
BC001274 AAH01274 Q9BVE2  
BC168380 AAI68380    
AB058694 BAB47420 Q14004 EC 2.7.11.23
EC 2.7.11.22
AK223053 BAD96773 Q14004 EC 2.7.11.23
EC 2.7.11.22
AJ297709 CAC10400 Q14004 EC 2.7.11.23
EC 2.7.11.22
AJ297710 CAC10401 Q14004 EC 2.7.11.23
EC 2.7.11.22

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CDK13 NP_003709 M.musculus Cdk13 69562 Gene Info NP_001074527 96
R.norvegicus Cdk13 306998   XP_225404 95
A.thaliana CDKC2 836620   NP_201301 53
A.thaliana CDKC;1 830891   NP_196589 53
A.gambiae AgaP_AGAP004780 1278447   XP_318036 50
D.melanogaster CG7597 40385   NP_730643 46
C.elegans B0285.1 175559   NP_497873 43

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)