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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. TNFSF15, tumor necrosis factor (ligand) superfamily, member 15
Sequence ID:NM_001204344
NM_005118
RefSeqGene ID:NG_011488
Entrez Gene ID:9966
Ensembl ID:ENSG00000181634

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:9q32Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:9: 117551610 - 117568412

Transcript StartTranscript EndChromosomal Start Chromosomal End
211594117551612117553185
15951642117554686117554733
16431685117555805117555847
16862011117568082117568407

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
7262219Full LengthBC069435tumor necrosis factor (ligand) superfamily, member 15
30915271Full LengthBC074941tumor necrosis factor (ligand) superfamily, member 15
30915494Full LengthBC074940tumor necrosis factor (ligand) superfamily, member 15
40030800Full LengthBC104462tumor necrosis factor (ligand) superfamily, member 15
40030803Full LengthBC104463tumor necrosis factor (ligand) superfamily, member 15

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005109  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001204344 NP_001191273    
NM_005118 NP_005109 O95150 TNF

Related Sequences

 
mRNAGenPeptSwissProt
AF039390 AAD08783 O95150
BC069435 AAH69435 O95150
BC074940 AAH74940 O95150
BC074941 AAH74941 O95150
BC104462 AAI04463 O95150
BC104463 AAI04464 O95150
AF520785 AAM77366 O95150
AY434464 AAR98573 O95150
AK291642 BAF84331 O95150

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TNFSF15 NP_005109 R.norvegicus Tnfsf15 252878   NP_665708 71
M.musculus Tnfsf15 326623 Gene Info NP_796345 68

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)