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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SCG3, Secretogranin III
Sequence ID:NM_013243
NM_001165257
RefSeqGene ID:NG_013214
Entrez Gene ID:29106
Ensembl ID:ENSG00000104112

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:15q21Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:15: 51973666 - 52012041

 Exon Info From UCSC:
NM_013243
NM_001165257

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4283082Full LengthBC014539secretogranin III
3537207IncompleteBC009511secretogranin III

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001165257 NP_001158729    
NM_013243 NP_037375 Q8WXD2  

Related Sequences

 
mRNAGenPeptSwissProt
AF078851 AAD44483 Q8WXD2
BC009511 AAH09511 Q8WXD2
BC014539 AAH14539 Q8WXD2
AF453583 AAL67431 Q8WXD2
AY359093 AAQ89451 Q8WXD2
AK290175 BAF82864 Q8WXD2
AK075314 BAG52108 Q8WXD2
AK296466 BAG59111 Q8WXD2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SCG3 NP_037375 M.musculus Scg3 20255 Gene Info NP_001158262 89
R.norvegicus Scg3 116635   NP_446308 88

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)