Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. IST1, Increased sodium tolerance 1 homolog (yeast)
Sequence ID:NM_001270976
NM_001270975
NM_014761
NM_001270977
NM_001270978
NM_001270979
Entrez Gene ID:9798
Ensembl ID:ENSG00000182149

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:16q22.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:16: 71929444 - 71962906

Transcript StartTranscript EndChromosomal Start Chromosomal End
1477192944571929491
481507194952871949630
1513317195036471950544
3324197195094971951036
4205037195464171954724
5046147195524571955355
6158217195637671956582
8229147195719071957282
9159597195867571958719
96023497196151671962905

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2819828Full LengthBC000430KIAA0174
2819828Full LengthBC004359KIAA0174
3350789Full LengthBC000116KIAA0174
6009274Full LengthBC103745KIAA0174

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_055576  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001270975 NP_001257904    
NM_001270976 NP_001257905    
NM_001270977 NP_001257906    
NM_001270978 NP_001257907    
NM_001270979 NP_001257908    
NM_014761 NP_055576   DUF292

Related Sequences

 
mRNAGenPeptSwissProt
BC000116 AAH00116 P53990
BC000430 AAH00430 P53990
BC004359 AAH04359 P53990
BC103745 AAI03746 P53990
HQ447682 ADQ32167  
D79996 BAA11491 P53990
AB097052 BAC77405 P53990
AK291388 BAF84077 A8K5S3
AK293022 BAF85711 P53990
AK293040 BAF85729 A8KAH5
AK295066 BAG58114 B4DHF3
AK297088 BAG59603 B4DLP1
AK297336 BAG59792 B4DM80
AK301918 BAG63341 B4DXC9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens IST1 NP_055576 M.musculus 2400003C14Rik 71955 Gene Info NP_082294 97
R.norvegicus Ist1 307833   NP_001017454 96
A.gambiae AgaP_AGAP005882 1276549   XP_315909 60
D.melanogaster CG10103 38750   NP_648058 58
C.elegans K10C8.3 179737   NP_506170 56

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)